{
  "skills": [
    {
      "id": "skl_bio_tools_catalog",
      "name": "bio-tools-catalog",
      "plugin": "cwc-science",
      "description": "Typed catalog of Claude Science's 24 bundled bio-tools MCP servers (pubmed, biomart, chembl, clinical_trials, genomes, variants, and 18 more — 466 real tools total, live-verified 2026-07-04) plus an on-demand invoker script. NOT a standing MCP registration — nothing here loads into every agent turn. Use when a task needs real biomedical/genomic/chemistry data (a PubMed search, a gene cross-reference, a ChEMBL compound lookup, a clinical trial search, etc.) and Claude Science is installed on this Mac. Read tools.json to find the right package/tool, then invoke it once via call_tool.py. Requires Claude Science (Claude Bioscience) to be installed — check with plugins/cwc-engineering/skills/platform-doctor first if unsure.",
      "summary": "Typed catalog of Claude Science's 24 bundled bio-tools MCP servers (pubmed, biomart, chembl, clinical_trials, genomes, variants, and 18 more — 466 real tools total, live-verified 2026-07-04) plus an on-demand invoker script.",
      "gated": 0,
      "source_path": "plugins/cwc-science/skills/bio-tools-catalog/SKILL.md",
      "created_at": "2026-07-10 18:13:13",
      "cite_as": "https://subagentskills.com/api/skills/skl_bio_tools_catalog"
    },
    {
      "id": "skl_determinism_harness",
      "name": "determinism-harness",
      "plugin": "cwc-science",
      "description": "Double-run determinism verification for any pipeline, generator, or seeded computation: runs a shell command TWICE in fresh temp working dirs, diffs the declared output files (byte-identical by default, or a normalized mode that first strips caller-declared volatile regex patterns like timestamps/run-ids), and returns a typed verdict {deterministic, first_divergent_file, diff_excerpt} plus a CLI with meaningful exit codes (0/1/2). Generalizes this repo's two real double-run precedents: the corpus pipeline's run-twice byte-identical reproducibility check and scripts/build-graph.py's byte-identical-on-unchanged-tree artifact discipline. Use when the user asks \"is this pipeline deterministic\", \"verify reproducibility\", \"run it twice and diff\", \"check the generator doesn't churn\", or before committing any generated artifact whose diff should mean something. Do NOT use for flaky-TEST hunting (run the test runner's own repeat tooling), for cross-machine reproducibility (this harness only certifies same-machine double-run identity — an honest, narrower claim), or on commands with side effects outside their working directory (each run gets a fresh temp cwd; external state is not isolated).",
      "summary": "Double-run determinism verification for any pipeline, generator, or seeded computation: runs a shell command TWICE in fresh temp working dirs, diffs the declared output files (byte-identical by default, or a normalized mode that first strips caller-declared volatile regex patterns like timestamps...",
      "gated": 0,
      "source_path": "plugins/cwc-science/skills/determinism-harness/SKILL.md",
      "created_at": "2026-07-10 18:13:13",
      "cite_as": "https://subagentskills.com/api/skills/skl_determinism_harness"
    },
    {
      "id": "skl_reproducible_analysis",
      "name": "reproducible-analysis",
      "plugin": "cwc-science",
      "description": "Reproducible scientific analysis grounded in Claude Science (Anthropic's AI workbench for scientists): every artifact carries the exact code, environment, and history that produced it; a reviewer pass checks citations, numbers, and figure-vs-code agreement; working pipelines are saved as reusable skills and version-controlled in this repo. Use on \"analyze\", \"reproduce\", \"review this figure/citation\", \"save this pipeline as a skill\", or any Claude Science work. Compute that hits SSH/HPC/Modal is operator-gated.",
      "summary": "Reproducible scientific analysis grounded in Claude Science (Anthropic's AI workbench for scientists): every artifact carries the exact code, environment, and history that produced it; a reviewer pass checks citations, numbers, and figure-vs-code agreement; working pipelines are saved as reusable...",
      "gated": 0,
      "source_path": "plugins/cwc-science/skills/reproducible-analysis/SKILL.md",
      "created_at": "2026-07-10 18:13:13",
      "cite_as": "https://subagentskills.com/api/skills/skl_reproducible_analysis"
    }
  ]
}